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When installing scripts on the cart, you need to make sure they are secure. A URL that starts with https: is secure, but a URL that starts with http: is not. Code can be placed using the Source Button on the WYSIWYG, on the columns or header/footer. We do have Google Analytics integrated into the cart, so once you sign up with Google you can put the code in Operations->Settings->Google Analytics. The UA number is all you need there and it should give you statistics for the whole site.
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